_index.org

Artificial Intelligence

Last edited: August 8, 2025

Artificial Intelligence is defined as the act of parameter estimation.

Toy example for Linear Regression

  • Imagine if we want to predict the price of a choclate bar
  • We feed in a bunch of bar weight vs. chocolate price data; that’s the training data
  • Then, we come up with a model of the training data
  • We then throw away the training data

Therefore, we can think of the model as a COMPRESSION of the training data; estimating parameters.

ASBMB

Last edited: August 8, 2025

ASBMB2023 Index

Last edited: August 8, 2025

2023 annual meeting of ASBMB.

Talks

Molecular Engineering

Christopher Barnes, StanfordSARS-COV2 Structural Analysis10.1126/sciimmunol.ade0958
Emma J. Chory, DukeRobotics-Assisted Directed Evolution10.1038/s41592-021-01348-4
Daniel-Adriano Silva, MonodDe novo biosensors10.1038/s41586-021-03258-z

Structure Determination and Machine Learning

Sonya Hanson, Flatironcyro-EM + ensemble reweighting10.1073/pnas.1419276111
Celia Schiffer, UMass MedDrug Resistance Analysis10.7554/eLife.77433
Arvind Ramanathan, Argonne LabModels of Interaction Analysis?, see GenSLMs
Jason K Perry, GileadStructure of COVID Replication

Protein Structure and Biophysics

ASCII

Last edited: August 8, 2025

ASCII represents each char as an integer, its “ascii value”.

  • Uppercase letters are sequentially numbered
  • Lowercase letters are sequentially numbered
  • Digits are sequentially numbered
  • Lowercase letters are 32 more than their uppercases (which means its a single bit flip)
char upper = 'A'; // 65
char lower = 'a'; // 97
char zero = '0'; // 48

ASEE Prism

Last edited: August 8, 2025